BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032C02SP1|AL429534
(881 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1211 1642 0.0
>3x_Contig1211
Length = 5913
Score = 1642 bits (821), Expect = 0.0
Identities = 867/885 (97%), Gaps = 4/885 (0%)
Strand = Plus / Plus
Query: 1 ttttgtttwtgattccgatgagaatctgaacgtggaccagggtgaa-ccgtgcatgacca 59
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3795 ttttgtttatgattccgatgagaatctgaacgtggaccagggtgaaaccgtgcatgacca 3854
Query: 60 cgatccattgcaggattttgacctcagtagaaagtacgatgc-ggctgtggc-gggcgcg 117
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 3855 cgatccattgcaggattttgacctcagtagaaagtacgatgccggctgtggccgggcgcg 3914
Query: 118 atatcgagggtatcctctccgttaggr-attgcsacggtcacgtgacarggtcgtctccg 176
|||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||
Sbjct: 3915 atatcgagggtatcctctccgttaggagattgcgacggtcacgtgacagggtcgtctccg 3974
Query: 177 atcatggatggtagtagacattcacttctgcataagcatgatcatggtagtggtcatggt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3975 atcatggatggtagtagacattcacttctgcataagcatgatcatggtagtggtcatggt 4034
Query: 237 tacagtcacgatcgtaggcatagtctcgtagacgttcacggacatagtcatggaacccat 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4035 tacagtcacgatcgtaggcatagtctcgtagacgttcacggacatagtcatggaacccat 4094
Query: 297 gctacggtagagcctgatccggatgaacgctacctaaacsataatgggactttccactac 356
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4095 gctacggtagagcctgatccggatgaacgctacctaaacgataatgggactttccactac 4154
Query: 357 accagtcaattccaggcaagaacacacgctgacaaattcgacttttaccagggcccaaag 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4155 accagtcaattccaggcaagaacacacgctgacaaattcgacttttaccagggcccaaag 4214
Query: 417 gagcacttccatggtgcggtgaacaaatccttaastctaasamatgcagcagtgtttgac 476
|||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||
Sbjct: 4215 gagcacttccatggtgcggtgaacaaatccttaagtctaagaaatgcagcagtgtttgac 4274
Query: 477 gaaggtgagtctaactcaacttcaatcatcacagatcagcatcatgctctcaatgaatcg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4275 gaaggtgagtctaactcaacttcaatcatcacagatcagcatcatgctctcaatgaatcg 4334
Query: 537 acggtaagcsgatcattcattcatcaaaatsatgcacatcacatacagaaccatgggcat 596
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4335 acggtaagcggatcattcattcatcaaaatgatgcacatcacatacagaaccatgggcat 4394
Query: 597 ctggactctcattcaacgactagcaaaaaatctttttttgatgatgaaagaggatataat 656
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4395 ctggactctcattcaacgactagcaagaaatctttttttgatgatgaaagaggatataat 4454
Query: 657 sacggamatcataactttacgggaaacaatggcgatagatacgaaaatggaggtgaagat 716
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4455 gacggaaatgataactttacgggaaacaatggcgatagatacgaaaatggaggtgaagat 4514
Query: 717 gaaagcttagaaagtgatgaatatgattctgcaagtgacgtctcagaggaatatgagtct 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4515 gaaagcttagaaagtgatgaatatgattctgcaagtgacgtctcagaggaatatgagtct 4574
Query: 777 cagttacataacctcttccataagataactaagtttaaaagcgatttccaccagctgatc 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4575 cagttacataacctcttccataagataactaagtttaaaagcgatttccaccagctgatc 4634
Query: 837 acaaaattagatgaggcatctctggaatccgcaaaggcaagacag 881
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4635 acaaaattagatgaggcatctctggaatccgcaaaggcaagacag 4679
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4382
Number of Sequences: 1807
Number of extensions: 4382
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 881
length of database: 10,358,551
effective HSP length: 16
effective length of query: 865
effective length of database: 10,329,639
effective search space: 8935137735
effective search space used: 8935137735
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)